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Second-Generation Sequence Data Analysis Job
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Engineering & Manufacturing > Other - Engineering & Manufacturing

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Job Description

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  • Posted: Thu, Jun 14, 2012
  • Time Left: Closed
  • Location: Anywhere
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  • Start: Immediately
  • Budget: $1,000 - $5,000
  • Fixed Price Job
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  • U.S. freelancers must have W9
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This task involves analysis of a next-generation sequencing data set to extract a number of parameters from the data. The DNA sample is a subsection of the human genome that has been targeted using a new technology for selecting parts of the genome for sequencing. The goal of the program is to assess the performance of the technique by analysis of the data.

Experience processing NGS data sets is required, and as these data sets are large, authentication of available compute resources will be the first milestone of the program. The program will consist of several phases:

1. Load all of the read data into a working set
2. For each read identify the genomic location where it maps
3. Produce a genome-wide map of all locations showing the amount of sequence coverage at each location.
4. Report the amount of coverage in several special categories:
a. coverage entirely inside the targeted regions
b. coverage by reads that are partly inside and partly outside the targeted regi...

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Job ID: 31224800
Avg $ | High $ | Low $ — Show Pricing
  • Submit Date (Latest)

 United Kingdom  |  
Experienced Bioinformatician with a PhD degree and over 4 years of working experience in various projects including sequence analysis, comparative...
 0.0   |  $0 Earnings   |  0 Jobs
Bid ID: 31342815  |  Submitted: Jun 19, 2012 12:13 ET 
Proposal SEALED

Rauno Matti Edward Alatalo      
Rauno Matti Edward Alatalo's identity has been verified.  Learn More
 Thailand  |  
Scientist in Molecular Biology for five years Bioinformatist for 10 years: Next Generation Sequencing with every existing platform, genomics,...
 0.0   |  $0 Earnings   |  0 Jobs
Bid ID: 31227959  |  Submitted: Jun 14, 2012 04:48 ET 
Proposal SEALED
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